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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910211.1_cds_XP_016460286.1_53722
CDS Infomation

[gene=LOC107783781] [db_xref=GeneID:107783781] [protein=potassium channel KAT3-like isoform X2] [protein_id=XP_016460286.1] [location=join(40545..40723,40812..41030,41114..41275,41377..41434,41540..41857,41948..42187,42279..42377,42482..42514,42613..42798,42930..43365,43452..43558)] [gbkey=CDS]
Sequence

ATGTCTTTTTCTTATGCTAAAAACTGCTTGCAACGGTTTTGTGTGGACGAGTTCCAAATG
AATACAGAAACCAGTAATGGTTTCTTCTCAAGTGATCTTCTCCCTTCGCTTGGAGCTAGA
ATTAACTATGCTACAAAGCTTCGAAAATTCATCATTTCGCCTTTCAATCCCCGCTATAGG
TGTTGGGAGATGTTTCTAGTTGTTTTGGTCATATACTCAGCCTGGATTTCTCCATTTGAG
TTTGCATTCTTGTCATACAAGGAAGATGATGCTTTATTCATCATTGACCACATTGTCAAC
TGCTTTTTTGCTATTGACATTTTCCTTACCTTCTTCGTCGCGTATCTTCATCGAGAGTCC
TATCTTCTTGTTGATGAACCTAAGAAAATTGCAATAAGGTACTTGTCAAGTTGGTTCATA
TTTGATGTATGCTCCACTGTACCATTTCAATCCTTGATCCTCCTTTTCACGGATCACAAA
GAAAGCGGTGGAGTTGGCTTCAAGTTGCTCAGCATGCTCAGACTTTGGCGTCTCAGACGA
GTCAGTGCCCTGTTTGCAAGACTTGAGAAGGATATCCGGTTTAACTACTTCTGGACAAGA
TGCACAAAACTCATATCAGTAACATTGTTTGCAGTGCACTGTGCTGGATGCTTTAACTAT
ATGATTGCAGATAGATATCCTGATCCAAGAAAAACATGGATTGGTGCTGTAAATCCTGAT
TTCAAGAAACAAAGCGTTGGGGACAGATATATAACTTCACTATATTGGTCTATTGTAACG
ATGACAACAACTGGTTATGGGGATTTGCATGCTGAGAACTCAAGGGAAATGTTGTTTGAC
ATTTTTTACATGTTATTCAACTTGGGATTGACTTCTTACATCATTGGAAACATGACTAAT
CTTGTTGTTCATTGGACCAGCCGCACCAGAAACTTTAGGGATACAGTGAAAGCAGCCCAA
GAATTTGCGAAAAGGAATCAGTTGCCTCCAAGGGTACAAGATCAGGTTTTGTCTCACATA
TGTCTCAAGTTCAGAACTGAAGCATTGAAACAAGATGAGACTCTCAATGGCCTGCCCAAA
GCTATCCGAACAAGCATTGCACATCACCTTTTTTTTCCTATAGTTCAAAATGTTCGTTTG
TTCCAAGGTGTTTCACCAAACCTCCTTTTCCAACTAGTTCCTGAAATGGAAGCTGAATAC
TTCCCTCCCAAGCAAGATGTGATTTTGCAGAATGAGGCTCCAACAGACCTGTATATAATA
GTTTCAGGAGCAGTGGAACTGATAGCAAAAATTGAAGGGCTAGAGCAAATAATAGGAAAG
GCTGTTGCAGGGGAACTATTTGGAGAAATAGGTGTTTTATGTGGGAGACCACAGCCATTT
GCTGTTCGAACTACTGAGATTTCTCAAATTCTACGGCTAAGCAGGACAGCATTGATGAAC
ATTCTTCGCGCAAATCCAGAAGATGAACGGGTAGTTATGAACAATCTTTTGCTGGGATTC
GGAGGCTTTGGTTATGTGGACCACCAAACAAATGGAGGGCCAGAAATCAAAAGACATCAT
GATACAGCACTGACTAGCATAGATATAAACAATTTGGAAGCTAGAGTTAAGAAGCAAGAG
GGAGATGATGTACAAGAAATAAACAAAAGCATGAATGATGTGTCATTAAATCTTGAAAAT
AAGAAGGAACTAAATGAGCAGAAAGTTGAGCTCATTGGACCAGATGAGAAGGGAACAAAG
AGCTGTCAACTGAAGCCTGAGGTCCCCTGTTGTTCTAACTCTTGTAGTACCATTTCAAGT
GGTTCTAAAGTGACAAAATCCACCAATAAGAGAGTAACCATTCACATGAAAAAGAACGAA
TCATTGCAAGGCCAGTTTGGGAAGCTAATAATTCTACCTGATTCACTAGAAGAGCTATTC
AGAGTAGCAGGTCAAAGATTTGGAGGCTACAATTTCAAGAAAGCTGTAAATGCAGAGGAT
GCTGAAATAGATGACATTGATGTCATCAGAGATGGCGACCATTTGTTTTTCCTTTAA

Peptide Sequence

PEP ID

XP_016460286.1
PEP Infomation

PREDICTED: potassium channel KAT3-like isoform X2 [Nicotiana tabacum]
Sequence

MSFSYAKNCLQRFCVDEFQMNTETSNGFFSSDLLPSLGARINYATKLRKFIISPFNPRYR
CWEMFLVVLVIYSAWISPFEFAFLSYKEDDALFIIDHIVNCFFAIDIFLTFFVAYLHRES
YLLVDEPKKIAIRYLSSWFIFDVCSTVPFQSLILLFTDHKESGGVGFKLLSMLRLWRLRR
VSALFARLEKDIRFNYFWTRCTKLISVTLFAVHCAGCFNYMIADRYPDPRKTWIGAVNPD
FKKQSVGDRYITSLYWSIVTMTTTGYGDLHAENSREMLFDIFYMLFNLGLTSYIIGNMTN
LVVHWTSRTRNFRDTVKAAQEFAKRNQLPPRVQDQVLSHICLKFRTEALKQDETLNGLPK
AIRTSIAHHLFFPIVQNVRLFQGVSPNLLFQLVPEMEAEYFPPKQDVILQNEAPTDLYII
VSGAVELIAKIEGLEQIIGKAVAGELFGEIGVLCGRPQPFAVRTTEISQILRLSRTALMN
ILRANPEDERVVMNNLLLGFGGFGYVDHQTNGGPEIKRHHDTALTSIDINNLEARVKKQE
GDDVQEINKSMNDVSLNLENKKELNEQKVELIGPDEKGTKSCQLKPEVPCCSNSCSTISS
GSKVTKSTNKRVTIHMKKNESLQGQFGKLIILPDSLEELFRVAGQRFGGYNFKKAVNAED
AEIDDIDVIRDGDHLFFL

Transcript Sequence

Gene sequence data has not been registered.